lianteyixingzhuanluzushiyanjiuyoucankaojiyinzuwuzhongzhuanluzudeyizhongyouxiaoshouduan。xiangduiyuchuantongzhuanluzucexueryan,lianteyixingzhuanluzucexukeyiquedingliangtiaoliandezhuanlufangxiangxing,weijiyindejinyibuzhushihegongnengfenxitigonggengzhunquedexinxi,tongshihaikeyiwajuezhuanluzuzhongdenon-coding rnaxinxi。yuanheshengwulianteyixingzhuanluzuxiangmuzhong,keyiwajuexindencrnayufanyi(antisense)zhuanluben;haikeyijinxingjiyinjiegoudeyanjiu,lirucaozongzijianding,weijiyinwangluodiaokongdeyanjiutigongyoulizhichi。yanjiubiaoming:henduojiyinzuquyujuyouzhengfuliandezhuanluben,fanyizhuanlushizhenhejiyindeyigetezheng,shiyizhongzhongyaodediaokongfangshi。duiyuyuanheyijididengzhenheshengwudecompactjiyinzu,changchangjuyouzhongdiejiyin。
技术流程
我们的优势
对转录本进行定量
nengyouxiaodefaxianfanyizhuanluben
基因注释准确
gengduodewajuencrnadexinxi
应用范围
I. 差异基因精确分析
nengzhenduibutongzhuanlufangxiangdejiyinjinxingjingquedebiaodaliangtongjijichayibiaodafenxi,congertuiduanchuyugongnengzhuangtaibianhuaxiangguanliandehouxuanjiyin,jieshichayijiyindegongnengfenleihexiangguandaixietonglu。
II. 原核生物操纵子分析
zhenduiyuanheshengwudelianteyixingzhuanluzufenxi,nengzhunquedijinxingcaozongzijiandinghefenxi。
III. 模式生物基因结构分析
moshishengwuyijingyouwanzhengdejiyinzhushixinxi,danshishijiyanjiuzhongcunzaigetichayixing。liyonglianteyixingzhuanluzucexukeyiduigetibiaodajiyindejiegoujinxingshendufenxi,duijiyinjinxingzhongzhushi。
服务流程
1. 根据样本信息和客户需求,制定个性化测序方案
2. RNA样品邮寄及样品质控
3. 测序样品制备(mRNA分离、片段化,链特异性转录组建库等)
4. 上机测序
5. 高通量数据分析
6. baogaojishujufasong
qizhongshujufenxibufenbaohan:
cexuduanxulietongjipipeiyushujutongji
cexuzhiliangpinggu(qc)
转录组表达量的计算
基因表达差异分析
chayijiyinshengwuxuetonglufenxi(daixietonglu/xinhaotonglu)
chayijiyingogongnengzhushi
预测新反义转录本
应用案例
duishanghanshamenshijundelianteyixingzhuanluzucexujifenxi
caiyongyizhongxindelianteyixingzhuanluzudecexufangfa(ssrna-seq)shibiechushanghanganjunty2junzhuzhongbianmahefeibianmaquxuliedezhuanlumobanlian,shibiechudaliangjiadingdexinfeibianmarna(ncrna),bingjisuanzheixiejiajiyindebiaodaliang。cifangfakeshibiechuxuduojiyindezhongdiezhuanluben,shibiexindesmall rna,zengjiajiyinzhushidezhunquexing,querencaozongzijiegou,qieshibiechuzhuanluhuoyuequyufeihuoyuequ。quzhengchangjunzhujiqiomprwuxiaotubiantijunzhu,meileiyangbenqu3gepingxingyang,gong6geyangben,jinxinglianteyixingzhuanluzucexu,caiyongdejiankufangfaweizongrnaquchuhetangtirnahoujingdnameixiaohua,shiyongsuijiyinwufanzhuanluhechengcdnadiyilian dierlianbuzaihecheng,xiujianhoudecdnajiajietou,zhihoutiaoxuan200-250bpdepianduangoujianwenku,pcrfujihouzaiillumina gapingtaishangcexu。cexusuodeshujubiduihuicankaojiyinzu,jinxingncrnayuce,bingshiyongrfamwenkujinxingzhushi,shibiechuxindencrna(jianxiatu)。tongguolianghuaomprwuxiaotubiantijunzhudejiyinbiaodaqingkuang,shibiechushoudulixiangguanweidiankongzhidexinquyu,bingjiehedanbaizufenxiyanzhengjiyinbiaodaliang。
参考文献
perkins tt, kingsley ra, fookes mc et al. (2009) a strand-specific rna–seq analysis of the transcriptome of the typhoid bacillus salmonella typhi. plos genetics.e1000569.